Note that I could not find a includes/mime.types file in main wiki
folder …
Newer MW versions locate that in includes/libs/mime/mime.types
I may be related: I could not manage to allow the upload of .sdf .mol .
But .cml files works (I followed these
instructions)
this works
aspirin
<jmolSmiles>aspirin</jmolSmiles>
Chair.cml
<jmolFile>Chair.cml</jmolFile>
this also works…
` `
` ``Chair.cml`
` `
<jmol> <jmolApplet>
<uploadedFileContents>Chair.cml</uploadedFileContents> </jmolApplet>
</jmol>
this also works…
` `
` ``C`` `
` ``lightGray`` `
` ``400`` `
` `
demo - note: needs at least one char on first line of inline content
` `
Menthol OpenBabel02151916433D
31 31 0 0 0 0 0 0 0 0999 V2000
` 0.6797 1.2651 -0.2387 C 0 0 0 0 0 0 0 0 0 0 0 0`
` 1.3944 -0.0096 0.2024 C 0 0 0 0 0 0 0 0 0 0 0 0`
` 0.6695 -1.3027 -0.2371 C 0 0 2 0 0 0 0 0 0 0 0 0`
` -0.8129 -1.2397 0.2137 C 0 0 1 0 0 0 0 0 0 0 0 0`
` -1.5089 0.0539 -0.2208 C 0 0 0 0 0 0 0 0 0 0 0 0`
` -0.7680 1.3033 0.2480 C 0 0 2 0 0 0 0 0 0 0 0 0`
` -1.4711 2.5652 -0.2509 C 0 0 0 0 0 0 0 0 0 0 0 0`
` -1.5752 -2.3115 -0.3340 O 0 0 0 0 0 0 0 0 0 0 0 0`
` 1.4325 -2.5688 0.2868 C 0 0 0 0 0 0 0 0 0 0 0 0`
` 0.7873 -3.8964 -0.1292 C 0 0 0 0 0 0 0 0 0 0 0 0`
` 2.8961 -2.5942 -0.1835 C 0 0 0 0 0 0 0 0 0 0 0 0`
` 1.2254 2.1343 0.1484 H 0 0 0 0 0 0 0 0 0 0 0 0`
` 0.7117 1.3341 -1.3336 H 0 0 0 0 0 0 0 0 0 0 0 0`
` 2.4050 0.0252 -0.2178 H 0 0 0 0 0 0 0 0 0 0 0 0`
` 1.5013 -0.0027 1.2947 H 0 0 0 0 0 0 0 0 0 0 0 0`
` -1.6086 0.0630 -1.3151 H 0 0 0 0 0 0 0 0 0 0 0 0`
` -2.5371 0.0569 0.1639 H 0 0 0 0 0 0 0 0 0 0 0 0`
` 0.6850 -1.3476 -1.3355 H 0 0 0 0 0 0 0 0 0 0 0 0`
` -0.8654 -1.3281 1.3056 H 0 0 0 0 0 0 0 0 0 0 0 0`
` -0.7714 1.3230 1.3457 H 0 0 0 0 0 0 0 0 0 0 0 0`
` -1.4921 2.6034 -1.3455 H 0 0 0 0 0 0 0 0 0 0 0 0`
` -0.9581 3.4631 0.1088 H 0 0 0 0 0 0 0 0 0 0 0 0`
` -2.5048 2.6021 0.1085 H 0 0 0 0 0 0 0 0 0 0 0 0`
` -1.4957 -2.2720 -1.3025 H 0 0 0 0 0 0 0 0 0 0 0 0`
` 1.4411 -2.5381 1.3844 H 0 0 0 0 0 0 0 0 0 0 0 0`
` 0.5863 -3.9212 -1.2054 H 0 0 0 0 0 0 0 0 0 0 0 0`
` -0.1467 -4.0734 0.4111 H 0 0 0 0 0 0 0 0 0 0 0 0`
` 1.4390 -4.7445 0.1088 H 0 0 0 0 0 0 0 0 0 0 0 0`
` 2.9614 -2.5170 -1.2741 H 0 0 0 0 0 0 0 0 0 0 0 0`
` 3.3900 -3.5247 0.1184 H 0 0 0 0 0 0 0 0 0 0 0 0`
` 3.4778 -1.7803 0.2581 H 0 0 0 0 0 0 0 0 0 0 0 0`
` 1 2 1 0 0 0 0`
` 1 12 1 0 0 0 0`
` 1 13 1 0 0 0 0`
` 2 3 1 0 0 0 0`
` 2 14 1 0 0 0 0`
` 2 15 1 0 0 0 0`
` 3 4 1 1 0 0 0`
` 3 9 1 0 0 0 0`
` 3 18 1 0 0 0 0`
` 4 5 1 0 0 0 0`
` 4 8 1 0 0 0 0`
` 4 19 1 1 0 0 0`
` 5 6 1 0 0 0 0`
` 5 16 1 0 0 0 0`
` 5 17 1 0 0 0 0`
` 6 1 1 0 0 0 0`
` 6 7 1 0 0 0 0`
` 6 20 1 1 0 0 0`
` 7 21 1 0 0 0 0`
` 7 22 1 0 0 0 0`
` 7 23 1 0 0 0 0`
` 8 24 1 0 0 0 0`
` 9 10 1 0 0 0 0`
` 9 11 1 0 0 0 0`
` 9 25 1 0 0 0 0`
`10 26 1 0 0 0 0`
`10 27 1 0 0 0 0`
`10 28 1 0 0 0 0`
`11 29 1 0 0 0 0`
`11 30 1 0 0 0 0`
`11 31 1 0 0 0 0`
M END
` `
` `
` `
` `
` `` spacefill `
` `` C `
` `
` `
` `
` `` ball and stick `
` `` C `
` `
` `
` `` spin on `
` `` spin off `
` `` false `` `
` `` spin `
` `` C `
` `
` `
` `` C `
` `-
` `` color CPK `
` `` true `
` `
` `
` `-
` `` blue `
` `
` `
` `-
` `` green `
` `
` `
` `
` `
` `` C `
` ``false`
` `-
` `` color CPK `
` `` true `
` `
` `
` `-
` `` blue `
` `
` `
` `-
` `` green `
` `
` `
` `
Using script
` `
` ``A`` `
` `
This box might hold a 3D model
` ``blueTint`` `
` ``500`` `
` `
` `
``
<jmol>
<jmolApplet>
<name>A</name>
<title>This box might hold a 3D model</title>
<color>blueTint</color>
<size>500</size>
<script> echo Hi there! </script>
</jmolApplet>
</jmol>
</tr>
Using urlContents
` `
` ``B`` `
` `
A file retrieved from the PDB
Murine adipocyte lipid binding protein at pH 4.5 (1AB0.pdb)
` ``blueTint`` `
` ``300`` `
` `` `[`https://files.rcsb.org/download/1ab0.pdb.gz`](https://files.rcsb.org/download/1ab0.pdb.gz)` `
` ``2`` `
` ``spin popup`` `
` `